ASHI Forums Copyright (c) 2009 ExpressionEngine tag:ashi-hla.org,2009:10:23 B*4402 vs 4441 tag:ashi-hla.org,2009:forums/viewthread/.20 2009-10-15T17:40:29Z Carley Shaut PhD Our lab is looking for advice on resolving the two CWD alleles B*4402/4441 for bone marrow high-resolution typing.
Using our standard methods of One Lambda HD-SSO, sometimes these alleles can’t be resolved, especially in a patient who is also either B*15 or B*40. 

My question: when would you rule out B*4441 by allele frequency?

1) Both alleles are CWD alleles (Cano et al. 2007), and this is our current standard for HR results.
2) The NMDP allele frequency tables show that 4402 is very common in the US (high frequency and rank), 4441 is not listed.  However, being new to HR typing, we are nervous about using this data over the CWD standards.
3) Allele frequencies.net shows that B*4441 has the allele frequency of 0.000 for the US.
4) Literature searches and HistoCheck show that B*4441 differs from B*4402 by 2 nucleotides and 2 amino acids.

Thank you for any advice or discussion!

]]> Bone Marrow Transplantation Histocompatibility forum? tag:ashi-hla.org,2009:forums/viewthread/.16 2009-08-18T13:08:28Z Carley Shaut PhD Is there a web forum out there that focuses on bone marrow transplantation histocompatibility, through NMDP, ASHI, or others?

Since our lab is now offering high-resolution DNA typing to support our university’s program, it would be great to connect with similar labs. Possible topics: reporting NMDP codes and CWD alleles, high-resolution typing techniques such as HD-SSO technology, and how/when to report allele groups, etc.

I’d appreciate forum responses or personal e-mails. 
Thanks~
Carley

]]> Greetings from Dallas tag:ashi-hla.org,2009:forums/viewthread/.15 2009-07-03T11:40:46Z Peter Stastny MD We used to have a ‘Digital Discussions’ forum that was quite active. I wonder if we can get it started again. Does this Bulletin Board notify people by e-mail when there are new messages that might be of interest to them? Perhaps it is available and needs to be turned on… Lets hear from you!

-Peter

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